Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 AC116353.5-201ENST00000638148 1699 ntBASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 AC069148.1-201ENST00000608741 768 ntBASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40AQ8WXH6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 PVRIG2P-201ENST00000435460 978 ntBASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AC093458.2-201ENST00000623150 629 ntBASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 LINC00167-201ENST00000530583 1419 ntBASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40AQ8WXH6 AC005915.1-201ENST00000624912 2018 ntBASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 MIR662-201ENST00000384847 95 ntBASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms