Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 AL138831.2-201ENST00000606564 490 ntBASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 AC012306.2-201ENST00000609350 630 ntBASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 AC097493.4-201ENST00000641197 219 ntBASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 FRMD8P1-201ENST00000440433 1524 ntBASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 RNF152P1-201ENST00000397754 604 ntBASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 RN7SL606P-201ENST00000472779 293 ntBASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 AC005363.2-201ENST00000618631 242 ntBASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC44A1Q8WWI5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 AC026691.1-201ENST00000602502 2017 ntBASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 AL135999.2-201ENST00000622438 1686 ntBASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC44A1Q8WWI5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 AC046158.3-201ENST00000624947 2558 ntBASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 FAM210CP-201ENST00000445714 574 ntBASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC44A1Q8WWI5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 FAM220CP-201ENST00000395253 831 ntBASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 GUSBP12-201ENST00000513727 720 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms