Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 TSPY14P-201ENST00000303979 915 ntBASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 AP003071.4-201ENST00000562276 1284 ntBASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB3IL1Q8TBN0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 AC124947.2-201ENST00000547118 1133 ntBASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 AC024563.2-201ENST00000603282 481 ntBASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IL1Q8TBN0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 AC112698.1-201ENST00000510299 916 ntBASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 AL157888.1-201ENST00000631930 593 ntBASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB3IL1Q8TBN0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms