Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 AC112191.1-201ENST00000523689 701 ntBASIC21.17■□□□□ 0.98
RTL9Q8NET4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 AC099522.2-201ENST00000607001 744 ntBASIC21.17■□□□□ 0.98
RTL9Q8NET4 AC105339.1-204ENST00000636249 355 ntBASIC21.17■□□□□ 0.98
RTL9Q8NET4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.16■□□□□ 0.98
RTL9Q8NET4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 SPCS2P1-201ENST00000561636 679 ntBASIC21.16■□□□□ 0.98
RTL9Q8NET4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.16■□□□□ 0.98
RTL9Q8NET4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL9Q8NET4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 EGFEM1P-202ENST00000431685 1563 ntBASIC21.15■□□□□ 0.98
RTL9Q8NET4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 AC022145.2-201ENST00000598203 171 ntBASIC21.15■□□□□ 0.98
RTL9Q8NET4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTL9Q8NET4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL9Q8NET4 AL390961.4-201ENST00000623958 2535 ntBASIC21.15■□□□□ 0.98
RTL9Q8NET4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL9Q8NET4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL9Q8NET4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL9Q8NET4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.14■□□□□ 0.98
RTL9Q8NET4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTL9Q8NET4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL9Q8NET4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RTL9Q8NET4 AL035633.1-201ENST00000406139 838 ntBASIC21.14■□□□□ 0.98
RTL9Q8NET4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.14■□□□□ 0.98
RTL9Q8NET4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.14■□□□□ 0.98
RTL9Q8NET4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTL9Q8NET4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.14■□□□□ 0.98
RTL9Q8NET4 AC005412.3-201ENST00000580309 715 ntBASIC21.14■□□□□ 0.98
RTL9Q8NET4 AC092364.2-202ENST00000597012 1073 ntBASIC21.14■□□□□ 0.98
RTL9Q8NET4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
RTL9Q8NET4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.14■□□□□ 0.97
RTL9Q8NET4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RTL9Q8NET4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RTL9Q8NET4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RTL9Q8NET4 NOC2LP1-202ENST00000452600 2235 ntBASIC21.14■□□□□ 0.97
RTL9Q8NET4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTL9Q8NET4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms