Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DEPDC4Q8N2C3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 DOC2GP-204ENST00000639052 2548 ntBASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 AC060834.1-201ENST00000443027 2032 ntBASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 AC132872.1-201ENST00000566986 1195 ntBASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 AL358472.4-201ENST00000633140 710 ntBASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 AP000550.4-202ENST00000639755 178 ntBASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 AC103702.1-201ENST00000548801 2630 ntBASIC16.15■□□□□ 0.18
DEPDC4Q8N2C3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
DEPDC4Q8N2C3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.14■□□□□ 0.18
DEPDC4Q8N2C3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.14■□□□□ 0.18
DEPDC4Q8N2C3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
DEPDC4Q8N2C3 HYMAI-201ENST00000635591 3347 ntBASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 LINC01311-201ENST00000565162 1445 ntBASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 VENTXP5-201ENST00000523979 775 ntBASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEPDC4Q8N2C3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms