Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 AC002558.1-201ENST00000488906 803 ntBASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 AC124947.2-201ENST00000547118 1133 ntBASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 KRT18P22-201ENST00000402024 1347 ntBASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 AC112698.1-201ENST00000510299 916 ntBASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 AL136379.1-201ENST00000623471 2642 ntBASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM42Q8IWZ5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 AL157888.1-201ENST00000631930 593 ntBASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 AC026691.1-201ENST00000602502 2017 ntBASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms