Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 KRT17P3-201ENST00000420566 1262 ntBASIC16.34■□□□□ 0.21
LPCAT4Q643R3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 AC104390.1-201ENST00000555663 520 ntBASIC16.34■□□□□ 0.21
LPCAT4Q643R3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 AL139327.4-201ENST00000612362 153 ntBASIC16.34■□□□□ 0.21
LPCAT4Q643R3 MIR6786-201ENST00000616843 113 ntBASIC16.34■□□□□ 0.21
LPCAT4Q643R3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LPCAT4Q643R3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
LPCAT4Q643R3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 AP000692.2-201ENST00000608391 879 ntBASIC16.33■□□□□ 0.2
LPCAT4Q643R3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 AC069544.1-201ENST00000609399 999 ntBASIC16.33■□□□□ 0.2
LPCAT4Q643R3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 HLA-A-202ENST00000376806 1854 ntBASIC16.33■□□□□ 0.2
LPCAT4Q643R3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT4Q643R3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT4Q643R3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms