Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCL20P78556 AC005104.2-201ENST00000427818 678 ntBASIC13.65□□□□□ -0.22
CCL20P78556 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL20P78556 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL20P78556 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL20P78556 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL20P78556 MIR4758-201ENST00000577688 71 ntBASIC13.65□□□□□ -0.22
CCL20P78556 AL139327.4-201ENST00000612362 153 ntBASIC13.65□□□□□ -0.22
CCL20P78556 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL20P78556 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CCL20P78556 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL20P78556 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL20P78556 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCL20P78556 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL20P78556 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL20P78556 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL20P78556 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL20P78556 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL20P78556 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL20P78556 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL20P78556 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 AC080038.1-201ENST00000611274 1154 ntBASIC13.64□□□□□ -0.23
CCL20P78556 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CCL20P78556 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL20P78556 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL20P78556 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL20P78556 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL20P78556 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL20P78556 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL20P78556 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CCL20P78556 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 TNRC18P2-201ENST00000417666 2714 ntBASIC13.63□□□□□ -0.23
CCL20P78556 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCL20P78556 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.63□□□□□ -0.23
CCL20P78556 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms