Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.24□□□□□ -0.29
SNRPEP62304 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SNRPEP62304 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.24□□□□□ -0.29
SNRPEP62304 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.24□□□□□ -0.29
SNRPEP62304 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.24□□□□□ -0.29
SNRPEP62304 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SNRPEP62304 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 AC138907.5-202ENST00000569484 235 ntBASIC13.24□□□□□ -0.29
SNRPEP62304 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.24□□□□□ -0.29
SNRPEP62304 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.24□□□□□ -0.29
SNRPEP62304 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.24□□□□□ -0.29
SNRPEP62304 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SNRPEP62304 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.24□□□□□ -0.29
SNRPEP62304 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.24□□□□□ -0.29
SNRPEP62304 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNRPEP62304 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
SNRPEP62304 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 KRT8P32-201ENST00000512863 1461 ntBASIC13.23□□□□□ -0.29
SNRPEP62304 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 ALOX12P2-203ENST00000570921 1945 ntBASIC13.23□□□□□ -0.29
SNRPEP62304 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SNRPEP62304 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 LINC02012-201ENST00000608206 1725 ntBASIC13.23□□□□□ -0.29
SNRPEP62304 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 YBX1P4-201ENST00000392794 808 ntBASIC13.23□□□□□ -0.29
SNRPEP62304 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.23□□□□□ -0.29
SNRPEP62304 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 SLC7A5P2-201ENST00000553010 536 ntBASIC13.23□□□□□ -0.29
SNRPEP62304 AL603832.2-201ENST00000566195 2125 ntBASIC13.23□□□□□ -0.29
SNRPEP62304 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.23□□□□□ -0.29
SNRPEP62304 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 AL139385.1-201ENST00000611744 3272 ntBASIC13.23□□□□□ -0.29
SNRPEP62304 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 AC092053.1-201ENST00000605787 1936 ntBASIC13.23□□□□□ -0.29
SNRPEP62304 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNRPEP62304 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SNRPEP62304 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNRPEP62304 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.22□□□□□ -0.29
SNRPEP62304 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.22□□□□□ -0.29
SNRPEP62304 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNRPEP62304 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNRPEP62304 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNRPEP62304 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms