Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.85■□□□□ 0.29
AP1S2P56377 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S2P56377 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S2P56377 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP1S2P56377 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S2P56377 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP1S2P56377 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S2P56377 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
AP1S2P56377 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S2P56377 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S2P56377 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S2P56377 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
AP1S2P56377 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
AP1S2P56377 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S2P56377 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP1S2P56377 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP1S2P56377 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP1S2P56377 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 PRYP5-201ENST00000451909 266 ntBASIC16.84■□□□□ 0.29
AP1S2P56377 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.84■□□□□ 0.29
AP1S2P56377 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.84■□□□□ 0.29
AP1S2P56377 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.84■□□□□ 0.29
AP1S2P56377 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.84■□□□□ 0.29
AP1S2P56377 AC091304.2-201ENST00000564639 760 ntBASIC16.84■□□□□ 0.29
AP1S2P56377 AL139288.1-201ENST00000623748 933 ntBASIC16.84■□□□□ 0.29
AP1S2P56377 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S2P56377 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S2P56377 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.84■□□□□ 0.29
AP1S2P56377 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S2P56377 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S2P56377 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S2P56377 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S2P56377 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
AP1S2P56377 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.83■□□□□ 0.29
AP1S2P56377 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S2P56377 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S2P56377 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.83■□□□□ 0.29
AP1S2P56377 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S2P56377 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S2P56377 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S2P56377 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S2P56377 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S2P56377 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
AP1S2P56377 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
AP1S2P56377 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.83■□□□□ 0.28
AP1S2P56377 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S2P56377 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP1S2P56377 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S2P56377 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.83■□□□□ 0.28
AP1S2P56377 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S2P56377 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.83■□□□□ 0.28
AP1S2P56377 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S2P56377 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.83■□□□□ 0.28
AP1S2P56377 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.83■□□□□ 0.28
AP1S2P56377 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 LINC01711-201ENST00000598340 967 ntBASIC16.83■□□□□ 0.28
AP1S2P56377 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S2P56377 AL732292.2-201ENST00000609649 430 ntBASIC16.83■□□□□ 0.28
AP1S2P56377 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S2P56377 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP1S2P56377 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S2P56377 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.82■□□□□ 0.28
AP1S2P56377 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
AP1S2P56377 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
AP1S2P56377 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms