Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH12P55289 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.16■□□□□ 0.18
CDH12P55289 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH12P55289 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 LINC02012-201ENST00000608206 1725 ntBASIC16.16■□□□□ 0.18
CDH12P55289 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH12P55289 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH12P55289 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CDH12P55289 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 AC079328.2-201ENST00000561241 3354 ntBASIC16.15■□□□□ 0.18
CDH12P55289 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDH12P55289 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH12P55289 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
CDH12P55289 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH12P55289 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH12P55289 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH12P55289 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDH12P55289 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH12P55289 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CDH12P55289 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDH12P55289 AC083849.1-201ENST00000615227 514 ntBASIC16.15■□□□□ 0.18
CDH12P55289 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH12P55289 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDH12P55289 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
CDH12P55289 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH12P55289 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDH12P55289 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH12P55289 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.14■□□□□ 0.18
CDH12P55289 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDH12P55289 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH12P55289 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
CDH12P55289 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH12P55289 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH12P55289 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
CDH12P55289 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH12P55289 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH12P55289 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH12P55289 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH12P55289 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDH12P55289 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH12P55289 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH12P55289 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH12P55289 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH12P55289 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH12P55289 AC092053.1-201ENST00000605787 1936 ntBASIC16.13■□□□□ 0.17
CDH12P55289 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms