Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MRPL20P1-201ENST00000400819 433 ntBASIC12.68□□□□□ -0.38
APOC4P55056 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.68□□□□□ -0.38
APOC4P55056 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.68□□□□□ -0.38
APOC4P55056 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.68□□□□□ -0.38
APOC4P55056 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.68□□□□□ -0.38
APOC4P55056 AC140113.2-201ENST00000604370 208 ntBASIC12.68□□□□□ -0.38
APOC4P55056 AC023511.2-201ENST00000618803 211 ntBASIC12.68□□□□□ -0.38
APOC4P55056 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC12.68□□□□□ -0.38
APOC4P55056 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
APOC4P55056 AL390961.4-201ENST00000623958 2535 ntBASIC12.67□□□□□ -0.38
APOC4P55056 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
APOC4P55056 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
APOC4P55056 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 PRSS29P-201ENST00000440800 595 ntBASIC12.67□□□□□ -0.38
APOC4P55056 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.67□□□□□ -0.38
APOC4P55056 IGHV3-65-201ENST00000523210 341 ntBASIC12.67□□□□□ -0.38
APOC4P55056 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.67□□□□□ -0.38
APOC4P55056 AC040169.1-201ENST00000565382 521 ntBASIC12.67□□□□□ -0.38
APOC4P55056 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.67□□□□□ -0.38
APOC4P55056 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
APOC4P55056 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 AC133963.1-201ENST00000504166 1679 ntBASIC12.67□□□□□ -0.38
APOC4P55056 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
APOC4P55056 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC4P55056 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC4P55056 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC4P55056 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC4P55056 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
APOC4P55056 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
APOC4P55056 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
APOC4P55056 LINC00304-203ENST00000565008 1864 ntBASIC12.66□□□□□ -0.38
APOC4P55056 AC006116.8-202ENST00000587620 1550 ntBASIC12.66□□□□□ -0.38
APOC4P55056 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
APOC4P55056 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
APOC4P55056 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.66□□□□□ -0.38
APOC4P55056 BX842568.4-201ENST00000421222 227 ntBASIC12.66□□□□□ -0.38
APOC4P55056 AC108073.2-201ENST00000464002 357 ntBASIC12.66□□□□□ -0.38
APOC4P55056 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms