Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 LINC00982-205ENST00000420957 435 ntBASIC18.34■□□□□ 0.53
CACNA2D1P54289 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 RNA5SP415-201ENST00000517246 115 ntBASIC18.34■□□□□ 0.53
CACNA2D1P54289 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 AC106730.1-201ENST00000566722 1090 ntBASIC18.34■□□□□ 0.53
CACNA2D1P54289 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D1P54289 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D1P54289 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D1P54289 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D1P54289 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D1P54289 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D1P54289 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D1P54289 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D1P54289 AC141586.5-201ENST00000624546 2050 ntBASIC18.34■□□□□ 0.53
CACNA2D1P54289 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D1P54289 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D1P54289 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D1P54289 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.33■□□□□ 0.53
CACNA2D1P54289 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D1P54289 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D1P54289 HTR7P1-202ENST00000624664 4411 ntBASIC18.33■□□□□ 0.53
CACNA2D1P54289 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.33■□□□□ 0.53
CACNA2D1P54289 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D1P54289 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.33■□□□□ 0.52
CACNA2D1P54289 MIR574-201ENST00000385209 96 ntBASIC18.33■□□□□ 0.52
CACNA2D1P54289 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 UNC93B6-202ENST00000528242 690 ntBASIC18.33■□□□□ 0.52
CACNA2D1P54289 AC006557.2-201ENST00000592985 1240 ntBASIC18.33■□□□□ 0.52
CACNA2D1P54289 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.33■□□□□ 0.52
CACNA2D1P54289 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.33■□□□□ 0.52
CACNA2D1P54289 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CACNA2D1P54289 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CACNA2D1P54289 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.33■□□□□ 0.52
CACNA2D1P54289 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CACNA2D1P54289 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D1P54289 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 AC034105.1-201ENST00000563488 319 ntBASIC18.32■□□□□ 0.52
CACNA2D1P54289 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 AL353135.1-201ENST00000606729 504 ntBASIC18.32■□□□□ 0.52
CACNA2D1P54289 AL139424.1-201ENST00000607572 797 ntBASIC18.32■□□□□ 0.52
CACNA2D1P54289 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 GNAS-203ENST00000306120 1878 ntBASIC18.32■□□□□ 0.52
CACNA2D1P54289 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA2D1P54289 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D1P54289 PCDHA12-202ENST00000613593 2588 ntBASIC18.32■□□□□ 0.52
CACNA2D1P54289 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.31■□□□□ 0.52
CACNA2D1P54289 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CACNA2D1P54289 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CACNA2D1P54289 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA2D1P54289 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms