Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ATN1P54259 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.96■□□□□ 0.63
ATN1P54259 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.96■□□□□ 0.63
ATN1P54259 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.96■□□□□ 0.63
ATN1P54259 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ATN1P54259 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATN1P54259 AC046185.3-201ENST00000623228 1824 ntBASIC18.96■□□□□ 0.63
ATN1P54259 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC18.96■□□□□ 0.63
ATN1P54259 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.96■□□□□ 0.63
ATN1P54259 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.96■□□□□ 0.63
ATN1P54259 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.96■□□□□ 0.63
ATN1P54259 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.96■□□□□ 0.63
ATN1P54259 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.96■□□□□ 0.63
ATN1P54259 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC18.96■□□□□ 0.63
ATN1P54259 CR383656.12-201ENST00000549567 513 ntBASIC18.96■□□□□ 0.63
ATN1P54259 AL596325.1-201ENST00000563991 1082 ntBASIC18.96■□□□□ 0.63
ATN1P54259 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.96■□□□□ 0.63
ATN1P54259 AL662799.1-202ENST00000614205 422 ntBASIC18.96■□□□□ 0.63
ATN1P54259 AL161645.1-201ENST00000622716 1255 ntBASIC18.96■□□□□ 0.63
ATN1P54259 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.96■□□□□ 0.63
ATN1P54259 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.96■□□□□ 0.63
ATN1P54259 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.96■□□□□ 0.63
ATN1P54259 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATN1P54259 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ATN1P54259 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.95■□□□□ 0.62
ATN1P54259 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.95■□□□□ 0.62
ATN1P54259 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 HCG11-201ENST00000411553 5696 ntBASIC18.95■□□□□ 0.62
ATN1P54259 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 AC138932.1-201ENST00000534164 6830 ntBASIC18.95■□□□□ 0.62
ATN1P54259 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATN1P54259 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATN1P54259 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.95■□□□□ 0.62
ATN1P54259 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATN1P54259 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.95■□□□□ 0.62
ATN1P54259 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.95■□□□□ 0.62
ATN1P54259 NME2P1-201ENST00000426182 414 ntBASIC18.95■□□□□ 0.62
ATN1P54259 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.95■□□□□ 0.62
ATN1P54259 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.95■□□□□ 0.62
ATN1P54259 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.95■□□□□ 0.62
ATN1P54259 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.95■□□□□ 0.62
ATN1P54259 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.95■□□□□ 0.62
ATN1P54259 MIR4515-201ENST00000584082 81 ntBASIC18.95■□□□□ 0.62
ATN1P54259 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.95■□□□□ 0.62
ATN1P54259 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.95■□□□□ 0.62
ATN1P54259 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATN1P54259 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ATN1P54259 AC093677.2-201ENST00000600169 1863 ntBASIC18.94■□□□□ 0.62
ATN1P54259 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.94■□□□□ 0.62
ATN1P54259 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
ATN1P54259 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.94■□□□□ 0.62
ATN1P54259 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 HMGA1P7-201ENST00000406908 502 ntBASIC18.94■□□□□ 0.62
ATN1P54259 AC092580.3-201ENST00000430932 139 ntBASIC18.94■□□□□ 0.62
ATN1P54259 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.94■□□□□ 0.62
ATN1P54259 RN7SL692P-201ENST00000464677 288 ntBASIC18.94■□□□□ 0.62
ATN1P54259 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.94■□□□□ 0.62
ATN1P54259 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
ATN1P54259 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ATN1P54259 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC18.94■□□□□ 0.62
ATN1P54259 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.94■□□□□ 0.62
ATN1P54259 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms