Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
UBE2AP49459 AL355312.1-201ENST00000407115 2176 ntBASIC11.02□□□□□ -0.65
UBE2AP49459 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2AP49459 DDX43P3-201ENST00000441064 443 ntBASIC11.02□□□□□ -0.65
UBE2AP49459 AC092597.1-201ENST00000487352 616 ntBASIC11.02□□□□□ -0.65
UBE2AP49459 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2AP49459 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
UBE2AP49459 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2AP49459 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2AP49459 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.02□□□□□ -0.65
UBE2AP49459 GPR32P1-201ENST00000601788 811 ntBASIC11.02□□□□□ -0.65
UBE2AP49459 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2AP49459 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
UBE2AP49459 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
UBE2AP49459 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2AP49459 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC11.02□□□□□ -0.65
UBE2AP49459 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2AP49459 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UBE2AP49459 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UBE2AP49459 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2AP49459 AC046158.3-201ENST00000624947 2558 ntBASIC11.01□□□□□ -0.65
UBE2AP49459 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2AP49459 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.01□□□□□ -0.65
UBE2AP49459 AC009949.1-201ENST00000623048 1830 ntBASIC11.01□□□□□ -0.65
UBE2AP49459 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
UBE2AP49459 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
UBE2AP49459 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2AP49459 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
UBE2AP49459 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2AP49459 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.01□□□□□ -0.65
UBE2AP49459 HLA-F-220ENST00000434407 884 ntBASIC11.01□□□□□ -0.65
UBE2AP49459 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2AP49459 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
UBE2AP49459 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
UBE2AP49459 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
UBE2AP49459 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2AP49459 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2AP49459 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UBE2AP49459 AC139713.2-201ENST00000641328 2723 ntBASIC11.01□□□□□ -0.65
UBE2AP49459 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UBE2AP49459 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.01□□□□□ -0.65
UBE2AP49459 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2AP49459 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2AP49459 AL023806.1-201ENST00000603994 1649 ntBASIC11.01□□□□□ -0.65
UBE2AP49459 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.01□□□□□ -0.65
UBE2AP49459 AL353692.3-201ENST00000407031 1396 ntBASIC11.01□□□□□ -0.65
UBE2AP49459 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms