Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC1A6P48664 AC097374.2-201ENST00000618617 1306 ntBASIC17.05■□□□□ 0.32
SLC1A6P48664 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC1A6P48664 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A6P48664 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC1A6P48664 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SLC1A6P48664 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SLC1A6P48664 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SLC1A6P48664 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC1A6P48664 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC1A6P48664 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC1A6P48664 AL138966.2-201ENST00000621997 464 ntBASIC17.05■□□□□ 0.32
SLC1A6P48664 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A6P48664 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC1A6P48664 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A6P48664 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A6P48664 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A6P48664 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A6P48664 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A6P48664 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A6P48664 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC1A6P48664 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 AL391005.1-201ENST00000623953 2435 ntBASIC17.04■□□□□ 0.32
SLC1A6P48664 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SLC1A6P48664 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC1A6P48664 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC1A6P48664 AP003733.1-201ENST00000491725 852 ntBASIC17.04■□□□□ 0.32
SLC1A6P48664 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC1A6P48664 AC140113.3-201ENST00000605663 199 ntBASIC17.04■□□□□ 0.32
SLC1A6P48664 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC1A6P48664 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC1A6P48664 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A6P48664 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
SLC1A6P48664 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A6P48664 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC1A6P48664 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 LINC01568-207ENST00000641790 1380 ntBASIC17.03■□□□□ 0.32
SLC1A6P48664 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SLC1A6P48664 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC1A6P48664 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC1A6P48664 PCDHA1-201ENST00000378133 2726 ntBASIC17.03■□□□□ 0.32
SLC1A6P48664 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SLC1A6P48664 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC1A6P48664 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC1A6P48664 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC1A6P48664 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC1A6P48664 IGHV3-52-201ENST00000519770 353 ntBASIC17.03■□□□□ 0.32
SLC1A6P48664 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SLC1A6P48664 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC1A6P48664 PCDHB17P-201ENST00000539533 2393 ntBASIC17.03■□□□□ 0.32
SLC1A6P48664 AL662844.4-201ENST00000606367 2838 ntBASIC17.03■□□□□ 0.32
SLC1A6P48664 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
SLC1A6P48664 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A6P48664 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A6P48664 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SLC1A6P48664 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A6P48664 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC1A6P48664 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A6P48664 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC1A6P48664 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms