Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.33■□□□□ 0.84
NEDD4P46934 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
NEDD4P46934 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NEDD4P46934 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
NEDD4P46934 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NEDD4P46934 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NEDD4P46934 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
NEDD4P46934 AC092053.1-201ENST00000605787 1936 ntBASIC20.32■□□□□ 0.84
NEDD4P46934 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEDD4P46934 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEDD4P46934 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEDD4P46934 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEDD4P46934 AL590627.1-203ENST00000421194 1026 ntBASIC20.32■□□□□ 0.84
NEDD4P46934 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
NEDD4P46934 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.32■□□□□ 0.84
NEDD4P46934 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NEDD4P46934 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEDD4P46934 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NEDD4P46934 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEDD4P46934 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NEDD4P46934 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.32■□□□□ 0.84
NEDD4P46934 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.32■□□□□ 0.84
NEDD4P46934 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NEDD4P46934 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.31■□□□□ 0.84
NEDD4P46934 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4P46934 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.31■□□□□ 0.84
NEDD4P46934 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.31■□□□□ 0.84
NEDD4P46934 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.31■□□□□ 0.84
NEDD4P46934 AC093909.1-201ENST00000504731 1122 ntBASIC20.31■□□□□ 0.84
NEDD4P46934 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.31■□□□□ 0.84
NEDD4P46934 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.31■□□□□ 0.84
NEDD4P46934 MIR1199-201ENST00000621445 119 ntBASIC20.31■□□□□ 0.84
NEDD4P46934 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4P46934 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.31■□□□□ 0.84
NEDD4P46934 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4P46934 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4P46934 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4P46934 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NEDD4P46934 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.31■□□□□ 0.84
NEDD4P46934 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4P46934 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NEDD4P46934 LINC02012-201ENST00000608206 1725 ntBASIC20.31■□□□□ 0.84
NEDD4P46934 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
NEDD4P46934 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.3■□□□□ 0.84
NEDD4P46934 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
NEDD4P46934 AP000347.1-202ENST00000435868 847 ntBASIC20.3■□□□□ 0.84
NEDD4P46934 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.3■□□□□ 0.84
NEDD4P46934 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.3■□□□□ 0.84
NEDD4P46934 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NEDD4P46934 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NEDD4P46934 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NEDD4P46934 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.3■□□□□ 0.84
NEDD4P46934 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NEDD4P46934 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.3■□□□□ 0.84
NEDD4P46934 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.3■□□□□ 0.84
NEDD4P46934 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 AC012313.1-201ENST00000593393 3059 ntBASIC20.3■□□□□ 0.84
NEDD4P46934 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEDD4P46934 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.29■□□□□ 0.84
NEDD4P46934 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.29■□□□□ 0.84
NEDD4P46934 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 RNA5SP415-201ENST00000517246 115 ntBASIC20.29■□□□□ 0.84
NEDD4P46934 UNC93B6-202ENST00000528242 690 ntBASIC20.29■□□□□ 0.84
NEDD4P46934 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.29■□□□□ 0.84
NEDD4P46934 BX640515.1-201ENST00000617215 977 ntBASIC20.29■□□□□ 0.84
NEDD4P46934 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NEDD4P46934 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.29■□□□□ 0.84
NEDD4P46934 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.29■□□□□ 0.84
NEDD4P46934 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NEDD4P46934 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEDD4P46934 AC099398.1-201ENST00000567919 2776 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms