Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.54■□□□□ 0.72
PRPHP41219 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PRPHP41219 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.54■□□□□ 0.72
PRPHP41219 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 AC097637.2-201ENST00000624096 1997 ntBASIC19.53■□□□□ 0.72
PRPHP41219 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
PRPHP41219 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRPHP41219 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PRPHP41219 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PRPHP41219 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.53■□□□□ 0.72
PRPHP41219 BX005266.1-201ENST00000473402 457 ntBASIC19.53■□□□□ 0.72
PRPHP41219 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.53■□□□□ 0.72
PRPHP41219 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.53■□□□□ 0.72
PRPHP41219 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.53■□□□□ 0.72
PRPHP41219 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.53■□□□□ 0.72
PRPHP41219 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRPHP41219 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PRPHP41219 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.53■□□□□ 0.72
PRPHP41219 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRPHP41219 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
PRPHP41219 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PRPHP41219 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.52■□□□□ 0.72
PRPHP41219 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PRPHP41219 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.52■□□□□ 0.72
PRPHP41219 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.52■□□□□ 0.72
PRPHP41219 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.52■□□□□ 0.72
PRPHP41219 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.52■□□□□ 0.72
PRPHP41219 IFNL4P1-201ENST00000607083 540 ntBASIC19.52■□□□□ 0.72
PRPHP41219 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.52■□□□□ 0.72
PRPHP41219 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.52■□□□□ 0.72
PRPHP41219 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRPHP41219 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.52■□□□□ 0.72
PRPHP41219 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
PRPHP41219 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PRPHP41219 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
PRPHP41219 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRPHP41219 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PRPHP41219 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRPHP41219 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRPHP41219 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRPHP41219 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.52■□□□□ 0.71
PRPHP41219 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.52■□□□□ 0.71
PRPHP41219 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.52■□□□□ 0.71
PRPHP41219 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.52■□□□□ 0.71
PRPHP41219 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.51■□□□□ 0.71
PRPHP41219 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
PRPHP41219 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 AC080080.1-201ENST00000625121 2420 ntBASIC19.51■□□□□ 0.71
PRPHP41219 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PRPHP41219 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PRPHP41219 LINC00982-205ENST00000420957 435 ntBASIC19.51■□□□□ 0.71
PRPHP41219 DUSP5P1-201ENST00000441325 1139 ntBASIC19.51■□□□□ 0.71
PRPHP41219 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.51■□□□□ 0.71
PRPHP41219 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PRPHP41219 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.51■□□□□ 0.71
PRPHP41219 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PRPHP41219 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PRPHP41219 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PRPHP41219 GPR89P-201ENST00000407924 1495 ntBASIC19.51■□□□□ 0.71
PRPHP41219 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.51■□□□□ 0.71
PRPHP41219 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRPHP41219 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms