Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNB2P17787 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHRNB2P17787 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB2P17787 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB2P17787 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CHRNB2P17787 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 AC078925.2-201ENST00000624013 1973 ntBASIC18.32■□□□□ 0.52
CHRNB2P17787 AC097637.2-201ENST00000624096 1997 ntBASIC18.32■□□□□ 0.52
CHRNB2P17787 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNB2P17787 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.32■□□□□ 0.52
CHRNB2P17787 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHRNB2P17787 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB2P17787 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CHRNB2P17787 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB2P17787 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB2P17787 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNB2P17787 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB2P17787 HTR7P1-202ENST00000624664 4411 ntBASIC18.31■□□□□ 0.52
CHRNB2P17787 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNB2P17787 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHRNB2P17787 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.31■□□□□ 0.52
CHRNB2P17787 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNB2P17787 HCG4P8-203ENST00000443049 980 ntBASIC18.31■□□□□ 0.52
CHRNB2P17787 AC106795.1-205ENST00000512851 1056 ntBASIC18.31■□□□□ 0.52
CHRNB2P17787 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHRNB2P17787 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CHRNB2P17787 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNB2P17787 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHRNB2P17787 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNB2P17787 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNB2P17787 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHRNB2P17787 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHRNB2P17787 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHRNB2P17787 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB2P17787 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHRNB2P17787 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNB2P17787 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
CHRNB2P17787 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNB2P17787 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNB2P17787 LINC00982-205ENST00000420957 435 ntBASIC18.3■□□□□ 0.52
CHRNB2P17787 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNB2P17787 BX005266.1-201ENST00000473402 457 ntBASIC18.3■□□□□ 0.52
CHRNB2P17787 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNB2P17787 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNB2P17787 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNB2P17787 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.3■□□□□ 0.52
CHRNB2P17787 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNB2P17787 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
CHRNB2P17787 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNB2P17787 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CHRNB2P17787 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNB2P17787 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNB2P17787 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHRNB2P17787 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNB2P17787 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms