Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.04■□□□□ 0.48
TCF4P15884 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.04■□□□□ 0.48
TCF4P15884 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TCF4P15884 HCG4P8-203ENST00000443049 980 ntBASIC18.04■□□□□ 0.48
TCF4P15884 ABCD1P5-201ENST00000445663 754 ntBASIC18.04■□□□□ 0.48
TCF4P15884 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.04■□□□□ 0.48
TCF4P15884 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.04■□□□□ 0.48
TCF4P15884 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TCF4P15884 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.04■□□□□ 0.48
TCF4P15884 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TCF4P15884 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TCF4P15884 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.04■□□□□ 0.48
TCF4P15884 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.04■□□□□ 0.48
TCF4P15884 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.03■□□□□ 0.48
TCF4P15884 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TCF4P15884 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.03■□□□□ 0.48
TCF4P15884 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TCF4P15884 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TCF4P15884 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 AC132008.2-207ENST00000454517 770 ntBASIC18.03■□□□□ 0.48
TCF4P15884 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.03■□□□□ 0.48
TCF4P15884 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 AL591684.3-201ENST00000605187 298 ntBASIC18.03■□□□□ 0.48
TCF4P15884 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.03■□□□□ 0.48
TCF4P15884 UBALD1-205ENST00000590891 2641 ntBASIC18.03■□□□□ 0.48
TCF4P15884 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TCF4P15884 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.03■□□□□ 0.48
TCF4P15884 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCF4P15884 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.02■□□□□ 0.48
TCF4P15884 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TCF4P15884 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.02■□□□□ 0.48
TCF4P15884 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.02■□□□□ 0.48
TCF4P15884 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.02■□□□□ 0.48
TCF4P15884 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.02■□□□□ 0.48
TCF4P15884 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.02■□□□□ 0.48
TCF4P15884 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.02■□□□□ 0.48
TCF4P15884 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.02■□□□□ 0.48
TCF4P15884 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCF4P15884 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TCF4P15884 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.02■□□□□ 0.48
TCF4P15884 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCF4P15884 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.02■□□□□ 0.47
TCF4P15884 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCF4P15884 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
TCF4P15884 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCF4P15884 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.02■□□□□ 0.47
TCF4P15884 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCF4P15884 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCF4P15884 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCF4P15884 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCF4P15884 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TCF4P15884 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TCF4P15884 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCF4P15884 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.01■□□□□ 0.47
TCF4P15884 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCF4P15884 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.01■□□□□ 0.47
TCF4P15884 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCF4P15884 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCF4P15884 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
TCF4P15884 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCF4P15884 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.01■□□□□ 0.47
TCF4P15884 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCF4P15884 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCF4P15884 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.01■□□□□ 0.47
TCF4P15884 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.01■□□□□ 0.47
TCF4P15884 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.01■□□□□ 0.47
TCF4P15884 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms