Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
FREM3P0C091 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
FREM3P0C091 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.71■□□□□ 0.11
FREM3P0C091 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.71■□□□□ 0.11
FREM3P0C091 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
FREM3P0C091 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.71■□□□□ 0.11
FREM3P0C091 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.71■□□□□ 0.11
FREM3P0C091 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM3P0C091 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
FREM3P0C091 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.71■□□□□ 0.11
FREM3P0C091 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.71■□□□□ 0.11
FREM3P0C091 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
FREM3P0C091 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
FREM3P0C091 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FREM3P0C091 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FREM3P0C091 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 SIGLEC30P-201ENST00000455569 941 ntBASIC15.7■□□□□ 0.1
FREM3P0C091 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.7■□□□□ 0.1
FREM3P0C091 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.7■□□□□ 0.1
FREM3P0C091 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
FREM3P0C091 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.7■□□□□ 0.1
FREM3P0C091 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM3P0C091 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.7■□□□□ 0.1
FREM3P0C091 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.7■□□□□ 0.1
FREM3P0C091 AC023274.1-201ENST00000418278 595 ntBASIC15.7■□□□□ 0.1
FREM3P0C091 AC087163.2-201ENST00000457299 853 ntBASIC15.7■□□□□ 0.1
FREM3P0C091 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM3P0C091 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.7■□□□□ 0.1
FREM3P0C091 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
FREM3P0C091 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.7■□□□□ 0.1
FREM3P0C091 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.7■□□□□ 0.1
FREM3P0C091 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.69■□□□□ 0.1
FREM3P0C091 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FREM3P0C091 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FREM3P0C091 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.69■□□□□ 0.1
FREM3P0C091 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
FREM3P0C091 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.69■□□□□ 0.1
FREM3P0C091 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.69■□□□□ 0.1
FREM3P0C091 HCG4B-203ENST00000450128 991 ntBASIC15.69■□□□□ 0.1
FREM3P0C091 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.69■□□□□ 0.1
FREM3P0C091 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.69■□□□□ 0.1
FREM3P0C091 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.69■□□□□ 0.1
FREM3P0C091 PCDHA12-202ENST00000613593 2588 ntBASIC15.69■□□□□ 0.1
FREM3P0C091 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.69■□□□□ 0.1
FREM3P0C091 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
FREM3P0C091 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.69■□□□□ 0.1
FREM3P0C091 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FREM3P0C091 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FREM3P0C091 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.68■□□□□ 0.1
FREM3P0C091 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM3P0C091 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM3P0C091 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM3P0C091 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FREM3P0C091 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.68■□□□□ 0.1
FREM3P0C091 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM3P0C091 AC093909.1-201ENST00000504731 1122 ntBASIC15.68■□□□□ 0.1
FREM3P0C091 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.68■□□□□ 0.1
FREM3P0C091 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.68■□□□□ 0.1
FREM3P0C091 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FREM3P0C091 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.68■□□□□ 0.1
FREM3P0C091 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FREM3P0C091 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.68■□□□□ 0.1
FREM3P0C091 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM3P0C091 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.68■□□□□ 0.1
FREM3P0C091 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM3P0C091 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FREM3P0C091 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FREM3P0C091 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms