Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRAP04437 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 AC034232.1-201ENST00000506026 1064 ntBASIC13.2□□□□□ -0.3
TCRAP04437 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.2□□□□□ -0.3
TCRAP04437 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRAP04437 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TCRAP04437 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRAP04437 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
TCRAP04437 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.19□□□□□ -0.3
TCRAP04437 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
TCRAP04437 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.19□□□□□ -0.3
TCRAP04437 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TCRAP04437 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TCRAP04437 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TCRAP04437 PRORSD1P-201ENST00000295112 541 ntBASIC13.19□□□□□ -0.3
TCRAP04437 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 MYCLP1-201ENST00000372451 1075 ntBASIC13.19□□□□□ -0.3
TCRAP04437 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.19□□□□□ -0.3
TCRAP04437 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRAP04437 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.19□□□□□ -0.3
TCRAP04437 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.19□□□□□ -0.3
TCRAP04437 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.19□□□□□ -0.3
TCRAP04437 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TCRAP04437 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TCRAP04437 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRAP04437 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRAP04437 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRAP04437 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRAP04437 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TCRAP04437 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TCRAP04437 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRAP04437 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRAP04437 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 HMGA1P5-201ENST00000412453 271 ntBASIC13.18□□□□□ -0.3
TCRAP04437 AC096633.1-201ENST00000422446 749 ntBASIC13.18□□□□□ -0.3
TCRAP04437 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 GCSHP5-201ENST00000443090 522 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms