Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 AC004980.1-204ENST00000429707 299 ntBASIC13.74□□□□□ -0.21
IFNA1P01562 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.74□□□□□ -0.21
IFNA1P01562 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
IFNA1P01562 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
IFNA1P01562 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
IFNA1P01562 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 LINC01311-201ENST00000565162 1445 ntBASIC13.73□□□□□ -0.21
IFNA1P01562 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.73□□□□□ -0.21
IFNA1P01562 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.73□□□□□ -0.21
IFNA1P01562 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.73□□□□□ -0.21
IFNA1P01562 AL050303.2-201ENST00000619798 666 ntBASIC13.73□□□□□ -0.21
IFNA1P01562 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 AC046185.3-201ENST00000623228 1824 ntBASIC13.73□□□□□ -0.21
IFNA1P01562 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.73□□□□□ -0.21
IFNA1P01562 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IFNA1P01562 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
IFNA1P01562 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.72□□□□□ -0.21
IFNA1P01562 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.72□□□□□ -0.21
IFNA1P01562 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.72□□□□□ -0.21
IFNA1P01562 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.72□□□□□ -0.21
IFNA1P01562 AC097658.1-201ENST00000475555 843 ntBASIC13.72□□□□□ -0.21
IFNA1P01562 UNC93B4-201ENST00000505679 747 ntBASIC13.72□□□□□ -0.21
IFNA1P01562 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.72□□□□□ -0.21
IFNA1P01562 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.72□□□□□ -0.21
IFNA1P01562 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 AC024909.3-201ENST00000611513 2257 ntBASIC13.72□□□□□ -0.21
IFNA1P01562 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms