Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.52□□□□□ -0.08
SIX6O95475 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SIX6O95475 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 LINC01311-201ENST00000565162 1445 ntBASIC14.52□□□□□ -0.08
SIX6O95475 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
SIX6O95475 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.52□□□□□ -0.09
SIX6O95475 NIFKP9-201ENST00000419265 221 ntBASIC14.52□□□□□ -0.09
SIX6O95475 RPS2P4-201ENST00000476944 856 ntBASIC14.52□□□□□ -0.09
SIX6O95475 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SIX6O95475 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.52□□□□□ -0.09
SIX6O95475 MIR6821-201ENST00000617625 74 ntBASIC14.52□□□□□ -0.09
SIX6O95475 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SIX6O95475 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SIX6O95475 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.52□□□□□ -0.09
SIX6O95475 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SIX6O95475 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIX6O95475 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIX6O95475 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIX6O95475 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIX6O95475 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SIX6O95475 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.52□□□□□ -0.09
SIX6O95475 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SIX6O95475 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.51□□□□□ -0.09
SIX6O95475 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.51□□□□□ -0.09
SIX6O95475 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 KRT8P9-201ENST00000558927 1449 ntBASIC14.51□□□□□ -0.09
SIX6O95475 HOXB1-202ENST00000577092 1414 ntBASIC14.51□□□□□ -0.09
SIX6O95475 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
SIX6O95475 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.51□□□□□ -0.09
SIX6O95475 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SIX6O95475 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 DDX43P3-201ENST00000441064 443 ntBASIC14.51□□□□□ -0.09
SIX6O95475 KRT16P5-201ENST00000455284 522 ntBASIC14.51□□□□□ -0.09
SIX6O95475 AC083906.2-201ENST00000511578 360 ntBASIC14.51□□□□□ -0.09
SIX6O95475 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.51□□□□□ -0.09
SIX6O95475 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.51□□□□□ -0.09
SIX6O95475 AC083880.1-201ENST00000608266 535 ntBASIC14.51□□□□□ -0.09
SIX6O95475 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SIX6O95475 AC073111.5-205ENST00000641717 521 ntBASIC14.51□□□□□ -0.09
SIX6O95475 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.51□□□□□ -0.09
SIX6O95475 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.51□□□□□ -0.09
SIX6O95475 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.51□□□□□ -0.09
SIX6O95475 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIX6O95475 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SIX6O95475 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.5□□□□□ -0.09
SIX6O95475 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.5□□□□□ -0.09
SIX6O95475 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SIX6O95475 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.5□□□□□ -0.09
SIX6O95475 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.5□□□□□ -0.09
SIX6O95475 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 SLC25A1P3-201ENST00000395415 828 ntBASIC14.5□□□□□ -0.09
SIX6O95475 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.5□□□□□ -0.09
SIX6O95475 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.5□□□□□ -0.09
SIX6O95475 AC130371.2-201ENST00000619443 611 ntBASIC14.5□□□□□ -0.09
SIX6O95475 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.5□□□□□ -0.09
SIX6O95475 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.5□□□□□ -0.09
SIX6O95475 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SIX6O95475 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIX6O95475 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms