Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.14■□□□□ 0.17
SOX30O94993 AL020989.1-201ENST00000422979 469 ntBASIC16.14■□□□□ 0.17
SOX30O94993 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX30O94993 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SOX30O94993 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX30O94993 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX30O94993 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.14■□□□□ 0.17
SOX30O94993 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SOX30O94993 MIR5100-201ENST00000579544 119 ntBASIC16.14■□□□□ 0.17
SOX30O94993 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SOX30O94993 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SOX30O94993 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX30O94993 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SOX30O94993 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX30O94993 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX30O94993 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX30O94993 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX30O94993 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX30O94993 SIGLEC16-201ENST00000599858 1437 ntBASIC16.13■□□□□ 0.17
SOX30O94993 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX30O94993 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SOX30O94993 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 ABCD1P5-201ENST00000445663 754 ntBASIC16.13■□□□□ 0.17
SOX30O94993 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 AC124947.2-201ENST00000547118 1133 ntBASIC16.13■□□□□ 0.17
SOX30O94993 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 AC093458.2-201ENST00000623150 629 ntBASIC16.13■□□□□ 0.17
SOX30O94993 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX30O94993 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SOX30O94993 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SOX30O94993 LINC02012-201ENST00000608206 1725 ntBASIC16.13■□□□□ 0.17
SOX30O94993 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX30O94993 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX30O94993 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 AC132938.5-201ENST00000624980 1813 ntBASIC16.12■□□□□ 0.17
SOX30O94993 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX30O94993 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SOX30O94993 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX30O94993 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SOX30O94993 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX30O94993 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 AC026396.1-201ENST00000419388 421 ntBASIC16.12■□□□□ 0.17
SOX30O94993 ACTG1P4-201ENST00000425123 1122 ntBASIC16.12■□□□□ 0.17
SOX30O94993 HCG4P8-203ENST00000443049 980 ntBASIC16.12■□□□□ 0.17
SOX30O94993 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX30O94993 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SOX30O94993 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX30O94993 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX30O94993 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.12■□□□□ 0.17
SOX30O94993 AL591684.3-201ENST00000605187 298 ntBASIC16.12■□□□□ 0.17
SOX30O94993 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX30O94993 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 AD000864.1-201ENST00000624076 2295 ntBASIC16.12■□□□□ 0.17
SOX30O94993 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX30O94993 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX30O94993 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX30O94993 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX30O94993 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX30O94993 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms