Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.6■□□□□ 0.41
RIPK2O43353 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RIPK2O43353 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.6■□□□□ 0.41
RIPK2O43353 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.6■□□□□ 0.41
RIPK2O43353 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.6■□□□□ 0.41
RIPK2O43353 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RIPK2O43353 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.6■□□□□ 0.41
RIPK2O43353 AL353692.3-201ENST00000407031 1396 ntBASIC17.6■□□□□ 0.41
RIPK2O43353 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RIPK2O43353 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.6■□□□□ 0.41
RIPK2O43353 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.6■□□□□ 0.41
RIPK2O43353 AC092364.2-201ENST00000596710 2692 ntBASIC17.6■□□□□ 0.41
RIPK2O43353 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RIPK2O43353 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RIPK2O43353 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RIPK2O43353 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RIPK2O43353 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.59■□□□□ 0.41
RIPK2O43353 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.59■□□□□ 0.41
RIPK2O43353 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.59■□□□□ 0.41
RIPK2O43353 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.59■□□□□ 0.41
RIPK2O43353 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 KRT17P2-201ENST00000300992 1314 ntBASIC17.59■□□□□ 0.41
RIPK2O43353 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.59■□□□□ 0.41
RIPK2O43353 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 TSPY15P-201ENST00000457163 923 ntBASIC17.59■□□□□ 0.41
RIPK2O43353 IGHV3-52-201ENST00000519770 353 ntBASIC17.59■□□□□ 0.41
RIPK2O43353 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.59■□□□□ 0.41
RIPK2O43353 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.59■□□□□ 0.41
RIPK2O43353 AC109462.3-201ENST00000573934 613 ntBASIC17.59■□□□□ 0.41
RIPK2O43353 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.59■□□□□ 0.41
RIPK2O43353 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.59■□□□□ 0.41
RIPK2O43353 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RIPK2O43353 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.59■□□□□ 0.41
RIPK2O43353 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RIPK2O43353 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
RIPK2O43353 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
RIPK2O43353 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RIPK2O43353 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RIPK2O43353 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.58■□□□□ 0.41
RIPK2O43353 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RIPK2O43353 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RIPK2O43353 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RIPK2O43353 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
RIPK2O43353 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RIPK2O43353 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.58■□□□□ 0.4
RIPK2O43353 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.58■□□□□ 0.4
RIPK2O43353 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
RIPK2O43353 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.58■□□□□ 0.4
RIPK2O43353 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.58■□□□□ 0.4
RIPK2O43353 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.58■□□□□ 0.4
RIPK2O43353 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RIPK2O43353 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.58■□□□□ 0.4
RIPK2O43353 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
RIPK2O43353 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 AC132872.4-202ENST00000622924 2756 ntBASIC17.58■□□□□ 0.4
RIPK2O43353 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.58■□□□□ 0.4
RIPK2O43353 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 HLA-A-202ENST00000376806 1854 ntBASIC17.58■□□□□ 0.4
RIPK2O43353 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
RIPK2O43353 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
RIPK2O43353 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RIPK2O43353 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.57■□□□□ 0.4
RIPK2O43353 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms