Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC005593.1-201ENST00000624894 515 ntBASIC17.96■□□□□ 0.47
MSI1O43347 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
MSI1O43347 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MSI1O43347 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
MSI1O43347 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MSI1O43347 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MSI1O43347 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.96■□□□□ 0.47
MSI1O43347 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.96■□□□□ 0.47
MSI1O43347 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.95■□□□□ 0.46
MSI1O43347 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
MSI1O43347 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MSI1O43347 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.95■□□□□ 0.46
MSI1O43347 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSI1O43347 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSI1O43347 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.95■□□□□ 0.46
MSI1O43347 PTCHD3P3-201ENST00000403073 906 ntBASIC17.95■□□□□ 0.46
MSI1O43347 RPS15P9-201ENST00000494093 319 ntBASIC17.95■□□□□ 0.46
MSI1O43347 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.95■□□□□ 0.46
MSI1O43347 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MSI1O43347 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MSI1O43347 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.95■□□□□ 0.46
MSI1O43347 AC141586.5-201ENST00000624546 2050 ntBASIC17.95■□□□□ 0.46
MSI1O43347 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.95■□□□□ 0.46
MSI1O43347 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.95■□□□□ 0.46
MSI1O43347 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.95■□□□□ 0.46
MSI1O43347 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.95■□□□□ 0.46
MSI1O43347 AL590787.1-201ENST00000568856 1315 ntBASIC17.95■□□□□ 0.46
MSI1O43347 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.95■□□□□ 0.46
MSI1O43347 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSI1O43347 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.94■□□□□ 0.46
MSI1O43347 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.94■□□□□ 0.46
MSI1O43347 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MSI1O43347 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.94■□□□□ 0.46
MSI1O43347 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.94■□□□□ 0.46
MSI1O43347 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.94■□□□□ 0.46
MSI1O43347 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.94■□□□□ 0.46
MSI1O43347 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.94■□□□□ 0.46
MSI1O43347 Z83851.2-201ENST00000609564 659 ntBASIC17.94■□□□□ 0.46
MSI1O43347 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.94■□□□□ 0.46
MSI1O43347 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.94■□□□□ 0.46
MSI1O43347 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.94■□□□□ 0.46
MSI1O43347 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 GPR89P-201ENST00000407924 1495 ntBASIC17.94■□□□□ 0.46
MSI1O43347 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MSI1O43347 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSI1O43347 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.94■□□□□ 0.46
MSI1O43347 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.93■□□□□ 0.46
MSI1O43347 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 SLC25A1P3-201ENST00000395415 828 ntBASIC17.93■□□□□ 0.46
MSI1O43347 AC009947.1-201ENST00000444350 727 ntBASIC17.93■□□□□ 0.46
MSI1O43347 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.93■□□□□ 0.46
MSI1O43347 AC034105.1-201ENST00000563488 319 ntBASIC17.93■□□□□ 0.46
MSI1O43347 AC145285.3-201ENST00000564603 959 ntBASIC17.93■□□□□ 0.46
MSI1O43347 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MSI1O43347 AL671883.3-201ENST00000603274 991 ntBASIC17.93■□□□□ 0.46
MSI1O43347 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
MSI1O43347 AL805961.1-202ENST00000641562 540 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms