Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.81■□□□□ 0.6
CCDC66A2RUB6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 AC113404.2-201ENST00000507884 177 ntBASIC18.81■□□□□ 0.6
CCDC66A2RUB6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC66A2RUB6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AGGF1P2-201ENST00000426656 2106 ntBASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AC022188.1-201ENST00000620960 1664 ntBASIC18.8■□□□□ 0.6
CCDC66A2RUB6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 TSPY15P-201ENST00000457163 923 ntBASIC18.8■□□□□ 0.6
CCDC66A2RUB6 ECEL1P2-202ENST00000465689 757 ntBASIC18.8■□□□□ 0.6
CCDC66A2RUB6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AC116407.2-201ENST00000613639 860 ntBASIC18.8■□□□□ 0.6
CCDC66A2RUB6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 AC007950.2-201ENST00000615045 2347 ntBASIC18.8■□□□□ 0.6
CCDC66A2RUB6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC66A2RUB6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 AC106886.4-201ENST00000623557 2502 ntBASIC18.79■□□□□ 0.6
CCDC66A2RUB6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC66A2RUB6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms