Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 OR6D1P-203ENST00000641209 4860 ntBASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA11Q9Y5H2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA11Q9Y5H2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA11Q9Y5H2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA11Q9Y5H2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 ARMC10P1-201ENST00000313754 855 ntBASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 TP73-AS1-210ENST00000637775 1455 ntBASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA11Q9Y5H2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 KRT8P10-201ENST00000450021 1447 ntBASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 LINC00265-3P-201ENST00000447588 903 ntBASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
PCDHGA11Q9Y5H2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 AC116353.5-201ENST00000638148 1699 ntBASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA11Q9Y5H2 AL353593.2-201ENST00000602529 1483 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms