Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 KRT18P1-202ENST00000452408 1331 ntBASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 IGHV3-41-201ENST00000613121 348 ntBASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB3Q9Y5G1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 REXO1L11P-201ENST00000620964 1927 ntBASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 TPSP2-201ENST00000561760 610 ntBASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 PRELID1P1-202ENST00000567272 903 ntBASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 AC011840.4-201ENST00000578471 627 ntBASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB3Q9Y5G1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 AC012615.1-201ENST00000565797 1299 ntBASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 AC124864.1-201ENST00000623408 392 ntBASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGB3Q9Y5G1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms