Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 AL662844.1-201ENST00000546340 181 ntBASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 AC139887.3-201ENST00000568585 713 ntBASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 FAM215A-202ENST00000632077 792 ntBASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 AC012640.2-201ENST00000561606 901 ntBASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 AL645608.8-201ENST00000606034 2086 ntBASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC4Q9Y5F7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 RPS2P28-201ENST00000314255 741 ntBASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 ACTG1P4-201ENST00000425123 1122 ntBASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 LAGE3P1-201ENST00000425356 484 ntBASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 AC079776.4-201ENST00000511039 504 ntBASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 AP001005.1-201ENST00000571755 1248 ntBASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 AC108860.2-201ENST00000562760 2183 ntBASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC4Q9Y5F7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.46■□□□□ 0.38
PCDHGC4Q9Y5F7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
PCDHGC4Q9Y5F7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGC4Q9Y5F7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGC4Q9Y5F7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC4Q9Y5F7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms