Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4S1Q9Y587 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 FAM197Y1-201ENST00000421178 764 ntBASIC16.42■□□□□ 0.22
AP4S1Q9Y587 AC116562.2-201ENST00000507042 360 ntBASIC16.42■□□□□ 0.22
AP4S1Q9Y587 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4S1Q9Y587 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 CRYGFP-201ENST00000418459 633 ntBASIC16.41■□□□□ 0.22
AP4S1Q9Y587 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 KRT18P65-201ENST00000439811 1286 ntBASIC16.41■□□□□ 0.22
AP4S1Q9Y587 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4S1Q9Y587 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms