Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 AL627223.1-201ENST00000416693 442 ntBASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 AC025678.2-201ENST00000562061 970 ntBASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1R1Q9NWW0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 AL355312.1-201ENST00000407115 2176 ntBASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HCFC1R1Q9NWW0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 BCRP1-201ENST00000444246 691 ntBASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 SPDYE11-202ENST00000450699 704 ntBASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 SPDYE9P-201ENST00000570642 692 ntBASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 AC005498.2-205ENST00000593218 784 ntBASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 SPDYE10P-202ENST00000612005 668 ntBASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 SPDYE8P-202ENST00000612377 668 ntBASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 AL645728.2-201ENST00000641974 660 ntBASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HCFC1R1Q9NWW0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 AC005237.2-201ENST00000434368 219 ntBASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.84■□□□□ 0.45
HCFC1R1Q9NWW0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms