Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 STK25P1-201ENST00000585406 838 ntBASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AC008608.2-201ENST00000606089 416 ntBASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AP001269.4-201ENST00000609611 512 ntBASIC15.18■□□□□ 0.02
CDH20Q9HBT6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 REXO1L6P-202ENST00000619970 1078 ntBASIC15.18■□□□□ 0.02
CDH20Q9HBT6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH20Q9HBT6 AP005117.1-201ENST00000584346 1413 ntBASIC15.17■□□□□ 0.02
CDH20Q9HBT6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 MTDHP3-201ENST00000594186 672 ntBASIC15.17■□□□□ 0.02
CDH20Q9HBT6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH20Q9HBT6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 PMPCAP1-201ENST00000508114 1576 ntBASIC15.16■□□□□ 0.02
CDH20Q9HBT6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH20Q9HBT6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms