Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.46■□□□□ 0.39
VPS11Q9H270 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VPS11Q9H270 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.46■□□□□ 0.39
VPS11Q9H270 AC068472.1-201ENST00000474589 881 ntBASIC17.46■□□□□ 0.39
VPS11Q9H270 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.46■□□□□ 0.39
VPS11Q9H270 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
VPS11Q9H270 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VPS11Q9H270 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.46■□□□□ 0.39
VPS11Q9H270 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS11Q9H270 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.46■□□□□ 0.39
VPS11Q9H270 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.46■□□□□ 0.39
VPS11Q9H270 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.46■□□□□ 0.38
VPS11Q9H270 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
VPS11Q9H270 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VPS11Q9H270 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
VPS11Q9H270 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
VPS11Q9H270 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.46■□□□□ 0.38
VPS11Q9H270 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VPS11Q9H270 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.38
VPS11Q9H270 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VPS11Q9H270 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.38
VPS11Q9H270 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS11Q9H270 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VPS11Q9H270 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VPS11Q9H270 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.45■□□□□ 0.38
VPS11Q9H270 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS11Q9H270 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS11Q9H270 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS11Q9H270 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.45■□□□□ 0.38
VPS11Q9H270 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS11Q9H270 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VPS11Q9H270 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VPS11Q9H270 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.45■□□□□ 0.38
VPS11Q9H270 YBX1P2-201ENST00000489612 999 ntBASIC17.45■□□□□ 0.38
VPS11Q9H270 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.45■□□□□ 0.38
VPS11Q9H270 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS11Q9H270 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VPS11Q9H270 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.45■□□□□ 0.38
VPS11Q9H270 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.45■□□□□ 0.38
VPS11Q9H270 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 GPR32P1-201ENST00000601788 811 ntBASIC17.45■□□□□ 0.38
VPS11Q9H270 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS11Q9H270 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.45■□□□□ 0.38
VPS11Q9H270 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VPS11Q9H270 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VPS11Q9H270 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS11Q9H270 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VPS11Q9H270 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS11Q9H270 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS11Q9H270 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.44■□□□□ 0.38
VPS11Q9H270 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 CICP6-201ENST00000457191 2729 ntBASIC17.44■□□□□ 0.38
VPS11Q9H270 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VPS11Q9H270 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS11Q9H270 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
VPS11Q9H270 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VPS11Q9H270 AL137013.1-201ENST00000432946 1228 ntBASIC17.44■□□□□ 0.38
VPS11Q9H270 AL359075.1-203ENST00000462729 1002 ntBASIC17.44■□□□□ 0.38
VPS11Q9H270 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS11Q9H270 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.44■□□□□ 0.38
VPS11Q9H270 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS11Q9H270 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.44■□□□□ 0.38
VPS11Q9H270 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VPS11Q9H270 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.44■□□□□ 0.38
VPS11Q9H270 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS11Q9H270 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms