Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 AC069152.1-201ENST00000438030 544 ntBASIC16.34■□□□□ 0.21
NR1H4Q96RI1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.34■□□□□ 0.21
NR1H4Q96RI1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 AC092053.1-201ENST00000605787 1936 ntBASIC16.33■□□□□ 0.21
NR1H4Q96RI1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NR1H4Q96RI1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.33■□□□□ 0.2
NR1H4Q96RI1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.33■□□□□ 0.2
NR1H4Q96RI1 TNRC18P2-201ENST00000417666 2714 ntBASIC16.32■□□□□ 0.2
NR1H4Q96RI1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 Z85996.1-201ENST00000494644 937 ntBASIC16.32■□□□□ 0.2
NR1H4Q96RI1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NR1H4Q96RI1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms