Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC24.1■■□□□ 1.45
TMC1Q8TDI8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC24.09■■□□□ 1.45
TMC1Q8TDI8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 MYCLP1-201ENST00000372451 1075 ntBASIC24.08■■□□□ 1.45
TMC1Q8TDI8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 AC005104.2-201ENST00000427818 678 ntBASIC24.08■■□□□ 1.45
TMC1Q8TDI8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 RNA5SP416-201ENST00000516838 111 ntBASIC24.08■■□□□ 1.45
TMC1Q8TDI8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC24.08■■□□□ 1.45
TMC1Q8TDI8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMC1Q8TDI8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 MIR1233-2-201ENST00000408138 82 ntBASIC24.07■■□□□ 1.44
TMC1Q8TDI8 MIR1233-1-201ENST00000408722 82 ntBASIC24.07■■□□□ 1.44
TMC1Q8TDI8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 RPS15P9-201ENST00000494093 319 ntBASIC24.07■■□□□ 1.44
TMC1Q8TDI8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 AC064836.3-201ENST00000607928 673 ntBASIC24.07■■□□□ 1.44
TMC1Q8TDI8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMC1Q8TDI8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms