Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.52■□□□□ 0.55
LMO3Q8TAP4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
LMO3Q8TAP4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 RNF216P1-203ENST00000404404 2427 ntBASIC18.51■□□□□ 0.55
LMO3Q8TAP4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 AP002414.1-201ENST00000391405 1147 ntBASIC18.51■□□□□ 0.55
LMO3Q8TAP4 DUSP5P1-201ENST00000441325 1139 ntBASIC18.51■□□□□ 0.55
LMO3Q8TAP4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMO3Q8TAP4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 AC025062.2-201ENST00000605477 670 ntBASIC18.5■□□□□ 0.55
LMO3Q8TAP4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMO3Q8TAP4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 FLJ38576-201ENST00000623820 2459 ntBASIC18.49■□□□□ 0.55
LMO3Q8TAP4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 AC021087.4-201ENST00000563761 564 ntBASIC18.49■□□□□ 0.55
LMO3Q8TAP4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 MTDHP4-201ENST00000600287 670 ntBASIC18.49■□□□□ 0.55
LMO3Q8TAP4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 AL589182.2-201ENST00000619332 1049 ntBASIC18.49■□□□□ 0.55
LMO3Q8TAP4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 AC078925.2-201ENST00000624013 1973 ntBASIC18.49■□□□□ 0.55
LMO3Q8TAP4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.49■□□□□ 0.55
LMO3Q8TAP4 NCF1C-201ENST00000438382 1427 ntBASIC18.49■□□□□ 0.55
LMO3Q8TAP4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LMO3Q8TAP4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms