Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 SPDYE22P-201ENST00000582158 798 ntBASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 AC027307.2-201ENST00000591252 911 ntBASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 ABALON-201ENST00000629058 1903 ntBASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AC142381.1-201ENST00000426099 345 ntBASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AP005018.1-201ENST00000525475 301 ntBASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AC104581.1-202ENST00000635932 2618 ntBASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AL354751.1-201ENST00000412768 1863 ntBASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AC016027.1-202ENST00000607927 1699 ntBASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 AC007274.1-201ENST00000439805 662 ntBASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL27A1Q8IZC6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 BANF1P1-201ENST00000553684 263 ntBASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 LINC00895-201ENST00000629028 1637 ntBASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.09■□□□□ 0.17
COL27A1Q8IZC6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.08■□□□□ 0.17
COL27A1Q8IZC6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms