Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 AL512604.3-201ENST00000569583 964 ntBASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM42Q8IWZ5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 C8orf49-201ENST00000525043 1968 ntBASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 AC009947.2-201ENST00000444014 672 ntBASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 NEK4P2-201ENST00000580004 1012 ntBASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 AC024563.2-201ENST00000603282 481 ntBASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 AC145285.6-201ENST00000604632 637 ntBASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 AC009154.2-201ENST00000621177 724 ntBASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM42Q8IWZ5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM42Q8IWZ5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms