Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 AC246785.2-201ENST00000432512 513 ntBASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 TSSC2-201ENST00000450217 709 ntBASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 AC093525.9-201ENST00000624961 1746 ntBASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 IER3-202ENST00000376377 1350 ntBASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 AC103564.2-201ENST00000432853 1299 ntBASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 AL590326.2-201ENST00000625139 305 ntBASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 AC106886.4-201ENST00000623557 2502 ntBASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LINC00346Q8IVM7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 SLC25A1P3-201ENST00000395415 828 ntBASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 AC092053.1-201ENST00000605787 1936 ntBASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms