Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SLC27A1Q6PCB7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC27A1Q6PCB7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 AC018470.1-201ENST00000624790 3129 ntBASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 FAM185BP-201ENST00000443595 716 ntBASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 KRT19P2-202ENST00000557173 1012 ntBASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 PDPK2P-202ENST00000562415 1191 ntBASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 AC007064.4-201ENST00000637740 555 ntBASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 BCAR1-209ENST00000546196 1340 ntBASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 AC129492.6-201ENST00000611383 1305 ntBASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC27A1Q6PCB7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC27A1Q6PCB7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC27A1Q6PCB7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 AC023141.13-201ENST00000604991 943 ntBASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 AC055717.3-201ENST00000622967 595 ntBASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC27A1Q6PCB7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC27A1Q6PCB7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC27A1Q6PCB7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC27A1Q6PCB7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC27A1Q6PCB7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC27A1Q6PCB7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC27A1Q6PCB7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC27A1Q6PCB7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms