Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 DGCR5-201ENST00000399539 862 ntBASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AC106886.1-201ENST00000568660 600 ntBASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 TMEM261P1-201ENST00000604899 340 ntBASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 AL499627.1-201ENST00000569373 2188 ntBASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 IGHV3-52-201ENST00000519770 353 ntBASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 AC104794.3-201ENST00000566840 1248 ntBASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO4Q2I0M5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RSPO4Q2I0M5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RSPO4Q2I0M5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 BCYRN1-201ENST00000418539 200 ntBASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 AC011495.1-201ENST00000498085 584 ntBASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 AC093677.2-201ENST00000600169 1863 ntBASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms