Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH17Q12864 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 MIR1224-201ENST00000408193 85 ntBASIC17.52■□□□□ 0.4
CDH17Q12864 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.52■□□□□ 0.4
CDH17Q12864 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH17Q12864 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.52■□□□□ 0.4
CDH17Q12864 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDH17Q12864 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CDH17Q12864 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH17Q12864 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDH17Q12864 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CDH17Q12864 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH17Q12864 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDH17Q12864 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH17Q12864 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH17Q12864 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDH17Q12864 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH17Q12864 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.52■□□□□ 0.39
CDH17Q12864 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH17Q12864 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH17Q12864 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH17Q12864 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH17Q12864 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH17Q12864 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH17Q12864 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH17Q12864 EGFEM1P-202ENST00000431685 1563 ntBASIC17.51■□□□□ 0.39
CDH17Q12864 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH17Q12864 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.51■□□□□ 0.39
CDH17Q12864 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 AC099336.1-202ENST00000602961 463 ntBASIC17.51■□□□□ 0.39
CDH17Q12864 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH17Q12864 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH17Q12864 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH17Q12864 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH17Q12864 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH17Q12864 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH17Q12864 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH17Q12864 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH17Q12864 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH17Q12864 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH17Q12864 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDH17Q12864 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH17Q12864 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH17Q12864 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH17Q12864 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH17Q12864 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 AP000867.4-201ENST00000641616 219 ntBASIC17.5■□□□□ 0.39
CDH17Q12864 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CDH17Q12864 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH17Q12864 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
CDH17Q12864 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH17Q12864 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CDH17Q12864 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH17Q12864 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 AC092053.1-201ENST00000605787 1936 ntBASIC17.49■□□□□ 0.39
CDH17Q12864 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH17Q12864 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CDH17Q12864 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms