Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TPM4P67936 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.46■□□□□ 0.71
TPM4P67936 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.46■□□□□ 0.71
TPM4P67936 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.46■□□□□ 0.71
TPM4P67936 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM4P67936 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.46■□□□□ 0.71
TPM4P67936 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.45■□□□□ 0.7
TPM4P67936 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.45■□□□□ 0.7
TPM4P67936 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.45■□□□□ 0.7
TPM4P67936 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.45■□□□□ 0.7
TPM4P67936 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TPM4P67936 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TPM4P67936 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM4P67936 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 KRT17P2-201ENST00000300992 1314 ntBASIC19.45■□□□□ 0.7
TPM4P67936 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.45■□□□□ 0.7
TPM4P67936 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.45■□□□□ 0.7
TPM4P67936 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM4P67936 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.44■□□□□ 0.7
TPM4P67936 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM4P67936 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TPM4P67936 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TPM4P67936 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM4P67936 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
TPM4P67936 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TPM4P67936 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.44■□□□□ 0.7
TPM4P67936 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.44■□□□□ 0.7
TPM4P67936 KRT18P48-201ENST00000434763 852 ntBASIC19.44■□□□□ 0.7
TPM4P67936 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.44■□□□□ 0.7
TPM4P67936 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TPM4P67936 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM4P67936 AC004263.2-201ENST00000617183 678 ntBASIC19.44■□□□□ 0.7
TPM4P67936 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TPM4P67936 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM4P67936 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TPM4P67936 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TPM4P67936 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM4P67936 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM4P67936 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM4P67936 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TPM4P67936 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM4P67936 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM4P67936 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM4P67936 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms