Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
WNT3P56703 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3P56703 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
WNT3P56703 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
WNT3P56703 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
WNT3P56703 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
WNT3P56703 AC009336.1-201ENST00000608941 1553 ntBASIC16.39■□□□□ 0.21
WNT3P56703 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.39■□□□□ 0.21
WNT3P56703 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.39■□□□□ 0.21
WNT3P56703 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.39■□□□□ 0.21
WNT3P56703 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.39■□□□□ 0.21
WNT3P56703 AC078925.2-201ENST00000624013 1973 ntBASIC16.39■□□□□ 0.21
WNT3P56703 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.39■□□□□ 0.21
WNT3P56703 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.39■□□□□ 0.21
WNT3P56703 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 AC009533.2-201ENST00000543664 586 ntBASIC16.39■□□□□ 0.21
WNT3P56703 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.39■□□□□ 0.21
WNT3P56703 TPSP2-201ENST00000561760 610 ntBASIC16.39■□□□□ 0.21
WNT3P56703 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
WNT3P56703 AC011467.2-201ENST00000598425 242 ntBASIC16.39■□□□□ 0.21
WNT3P56703 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 AD001527.2-201ENST00000622994 785 ntBASIC16.39■□□□□ 0.21
WNT3P56703 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3P56703 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.39■□□□□ 0.21
WNT3P56703 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.39■□□□□ 0.21
WNT3P56703 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.39■□□□□ 0.21
WNT3P56703 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
WNT3P56703 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 UBALD1-205ENST00000590891 2641 ntBASIC16.38■□□□□ 0.21
WNT3P56703 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
WNT3P56703 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.38■□□□□ 0.21
WNT3P56703 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 TOB2P1-201ENST00000469761 992 ntBASIC16.38■□□□□ 0.21
WNT3P56703 UNC93B7-201ENST00000509439 705 ntBASIC16.38■□□□□ 0.21
WNT3P56703 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.38■□□□□ 0.21
WNT3P56703 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.38■□□□□ 0.21
WNT3P56703 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.38■□□□□ 0.21
WNT3P56703 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.38■□□□□ 0.21
WNT3P56703 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
WNT3P56703 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
WNT3P56703 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3P56703 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3P56703 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
WNT3P56703 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
WNT3P56703 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
WNT3P56703 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3P56703 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3P56703 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3P56703 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3P56703 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3P56703 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.37■□□□□ 0.21
WNT3P56703 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3P56703 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3P56703 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3P56703 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3P56703 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3P56703 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms