Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.12■□□□□ 0.33
CDKN2DP55273 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKN2DP55273 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.12■□□□□ 0.33
CDKN2DP55273 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.12■□□□□ 0.33
CDKN2DP55273 AP000867.4-201ENST00000641616 219 ntBASIC17.12■□□□□ 0.33
CDKN2DP55273 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDKN2DP55273 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKN2DP55273 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKN2DP55273 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKN2DP55273 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDKN2DP55273 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CDKN2DP55273 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDKN2DP55273 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDKN2DP55273 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDKN2DP55273 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2DP55273 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2DP55273 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2DP55273 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2DP55273 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2DP55273 MIR1224-201ENST00000408193 85 ntBASIC17.11■□□□□ 0.33
CDKN2DP55273 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 POM121L3P-201ENST00000419331 1163 ntBASIC17.11■□□□□ 0.33
CDKN2DP55273 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2DP55273 AC093458.2-201ENST00000623150 629 ntBASIC17.11■□□□□ 0.33
CDKN2DP55273 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2DP55273 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2DP55273 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2DP55273 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2DP55273 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.11■□□□□ 0.33
CDKN2DP55273 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2DP55273 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2DP55273 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2DP55273 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2DP55273 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.1■□□□□ 0.33
CDKN2DP55273 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2DP55273 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2DP55273 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2DP55273 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2DP55273 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 NUS1P2-201ENST00000417358 873 ntBASIC17.1■□□□□ 0.33
CDKN2DP55273 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2DP55273 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2DP55273 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2DP55273 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2DP55273 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2DP55273 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2DP55273 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2DP55273 FLJ38576-201ENST00000623820 2459 ntBASIC17.1■□□□□ 0.33
CDKN2DP55273 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2DP55273 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2DP55273 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2DP55273 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2DP55273 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKN2DP55273 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2DP55273 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2DP55273 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms