Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NUP98P52948 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NUP98P52948 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.33■■□□□ 1.01
NUP98P52948 AC131009.4-201ENST00000624048 1740 ntBASIC21.33■■□□□ 1.01
NUP98P52948 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.33■■□□□ 1.01
NUP98P52948 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NUP98P52948 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NUP98P52948 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.33■■□□□ 1.01
NUP98P52948 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.33■■□□□ 1.01
NUP98P52948 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.33■■□□□ 1.01
NUP98P52948 AC092364.2-202ENST00000597012 1073 ntBASIC21.33■■□□□ 1.01
NUP98P52948 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.33■■□□□ 1.01
NUP98P52948 AC084121.4-201ENST00000641598 221 ntBASIC21.33■■□□□ 1.01
NUP98P52948 AF228730.8-201ENST00000642140 221 ntBASIC21.33■■□□□ 1.01
NUP98P52948 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
NUP98P52948 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.32■■□□□ 1
NUP98P52948 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NUP98P52948 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.32■■□□□ 1
NUP98P52948 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
NUP98P52948 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.32■■□□□ 1
NUP98P52948 AL671277.1-201ENST00000429656 993 ntBASIC21.32■■□□□ 1
NUP98P52948 SPDYE14P-201ENST00000442619 822 ntBASIC21.32■■□□□ 1
NUP98P52948 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
NUP98P52948 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.32■■□□□ 1
NUP98P52948 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.32■■□□□ 1
NUP98P52948 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.32■■□□□ 1
NUP98P52948 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.32■■□□□ 1
NUP98P52948 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
NUP98P52948 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.32■■□□□ 1
NUP98P52948 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NUP98P52948 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NUP98P52948 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.31■■□□□ 1
NUP98P52948 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.31■■□□□ 1
NUP98P52948 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.31■■□□□ 1
NUP98P52948 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.31■■□□□ 1
NUP98P52948 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.31■■□□□ 1
NUP98P52948 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 AC140878.1-201ENST00000565277 250 ntBASIC21.31■■□□□ 1
NUP98P52948 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.31■■□□□ 1
NUP98P52948 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.31■■□□□ 1
NUP98P52948 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.31■■□□□ 1
NUP98P52948 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.31■■□□□ 1
NUP98P52948 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NUP98P52948 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.31■■□□□ 1
NUP98P52948 GNAS-203ENST00000306120 1878 ntBASIC21.31■■□□□ 1
NUP98P52948 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NUP98P52948 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NUP98P52948 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NUP98P52948 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
NUP98P52948 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.3■■□□□ 1
NUP98P52948 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.3■■□□□ 1
NUP98P52948 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.3■■□□□ 1
NUP98P52948 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.3■■□□□ 1
NUP98P52948 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NUP98P52948 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.3■■□□□ 1
NUP98P52948 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.3■■□□□ 1
NUP98P52948 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NUP98P52948 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.29■■□□□ 1
NUP98P52948 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.29■■□□□ 1
NUP98P52948 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NUP98P52948 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.29■■□□□ 1
NUP98P52948 AC092580.3-201ENST00000430932 139 ntBASIC21.29■■□□□ 1
NUP98P52948 AC005237.2-201ENST00000434368 219 ntBASIC21.29■■□□□ 1
NUP98P52948 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.29■■□□□ 1
NUP98P52948 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms