Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASQ1P31415 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.66■□□□□ 0.58
CASQ1P31415 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASQ1P31415 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASQ1P31415 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.66■□□□□ 0.58
CASQ1P31415 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASQ1P31415 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASQ1P31415 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.66■□□□□ 0.58
CASQ1P31415 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
CASQ1P31415 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASQ1P31415 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 AC005052.1-201ENST00000625181 2492 ntBASIC18.65■□□□□ 0.58
CASQ1P31415 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.65■□□□□ 0.58
CASQ1P31415 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CASQ1P31415 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CASQ1P31415 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.65■□□□□ 0.58
CASQ1P31415 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 TSPY17P-201ENST00000450329 467 ntBASIC18.65■□□□□ 0.58
CASQ1P31415 NUDT16P1-203ENST00000513809 620 ntBASIC18.65■□□□□ 0.58
CASQ1P31415 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CASQ1P31415 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CASQ1P31415 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CASQ1P31415 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CASQ1P31415 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CASQ1P31415 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASQ1P31415 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.64■□□□□ 0.58
CASQ1P31415 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CASQ1P31415 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.64■□□□□ 0.58
CASQ1P31415 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CASQ1P31415 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 AL355802.2-201ENST00000402069 882 ntBASIC18.64■□□□□ 0.57
CASQ1P31415 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CASQ1P31415 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.64■□□□□ 0.57
CASQ1P31415 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.64■□□□□ 0.57
CASQ1P31415 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.64■□□□□ 0.57
CASQ1P31415 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.64■□□□□ 0.57
CASQ1P31415 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.64■□□□□ 0.57
CASQ1P31415 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.64■□□□□ 0.57
CASQ1P31415 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CASQ1P31415 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.64■□□□□ 0.57
CASQ1P31415 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CASQ1P31415 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASQ1P31415 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.63■□□□□ 0.57
CASQ1P31415 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.63■□□□□ 0.57
CASQ1P31415 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.63■□□□□ 0.57
CASQ1P31415 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.63■□□□□ 0.57
CASQ1P31415 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.63■□□□□ 0.57
CASQ1P31415 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.63■□□□□ 0.57
CASQ1P31415 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 SEC1P-202ENST00000473944 940 ntBASIC18.63■□□□□ 0.57
CASQ1P31415 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASQ1P31415 AC113404.2-201ENST00000507884 177 ntBASIC18.63■□□□□ 0.57
CASQ1P31415 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.63■□□□□ 0.57
CASQ1P31415 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.63■□□□□ 0.57
CASQ1P31415 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms