Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC3P19447 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC3P19447 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
ERCC3P19447 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC3P19447 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.05■□□□□ 0.8
ERCC3P19447 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
ERCC3P19447 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 AL805961.1-202ENST00000641562 540 ntBASIC20.05■□□□□ 0.8
ERCC3P19447 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC3P19447 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ERCC3P19447 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ERCC3P19447 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ERCC3P19447 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC3P19447 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC3P19447 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ERCC3P19447 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC3P19447 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC3P19447 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC3P19447 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ERCC3P19447 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
ERCC3P19447 AC097637.2-201ENST00000624096 1997 ntBASIC20.04■□□□□ 0.8
ERCC3P19447 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 KRT18P28-201ENST00000453838 1332 ntBASIC20.04■□□□□ 0.8
ERCC3P19447 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ERCC3P19447 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.04■□□□□ 0.8
ERCC3P19447 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ERCC3P19447 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 IGLL3P-201ENST00000412472 434 ntBASIC20.04■□□□□ 0.8
ERCC3P19447 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.04■□□□□ 0.8
ERCC3P19447 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.04■□□□□ 0.8
ERCC3P19447 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.04■□□□□ 0.8
ERCC3P19447 IGHV3-52-201ENST00000519770 353 ntBASIC20.04■□□□□ 0.8
ERCC3P19447 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.04■□□□□ 0.8
ERCC3P19447 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.04■□□□□ 0.8
ERCC3P19447 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ERCC3P19447 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.04■□□□□ 0.8
ERCC3P19447 C20orf181-201ENST00000623918 480 ntBASIC20.04■□□□□ 0.8
ERCC3P19447 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 AC106820.2-201ENST00000563775 3264 ntBASIC20.04■□□□□ 0.8
ERCC3P19447 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 GPR89P-201ENST00000407924 1495 ntBASIC20.04■□□□□ 0.8
ERCC3P19447 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC3P19447 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ERCC3P19447 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.03■□□□□ 0.8
ERCC3P19447 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ERCC3P19447 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ERCC3P19447 AP000997.3-201ENST00000623333 2250 ntBASIC20.03■□□□□ 0.8
ERCC3P19447 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 PTCHD3P3-201ENST00000403073 906 ntBASIC20.03■□□□□ 0.8
ERCC3P19447 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.03■□□□□ 0.8
ERCC3P19447 DDX43P3-201ENST00000441064 443 ntBASIC20.03■□□□□ 0.8
ERCC3P19447 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.03■□□□□ 0.8
ERCC3P19447 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ERCC3P19447 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.03■□□□□ 0.8
ERCC3P19447 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
ERCC3P19447 SNHG9-202ENST00000564014 471 ntBASIC20.03■□□□□ 0.8
ERCC3P19447 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.03■□□□□ 0.8
ERCC3P19447 AC010654.1-201ENST00000615722 808 ntBASIC20.03■□□□□ 0.8
ERCC3P19447 NOC2LP2-201ENST00000407594 1944 ntBASIC20.03■□□□□ 0.8
ERCC3P19447 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 AC009336.1-201ENST00000608941 1553 ntBASIC20.03■□□□□ 0.8
ERCC3P19447 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
ERCC3P19447 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC3P19447 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ERCC3P19447 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ERCC3P19447 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC3P19447 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC3P19447 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ERCC3P19447 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC3P19447 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC3P19447 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC3P19447 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC3P19447 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms